Freight Billing and Auditing Checklist
Freight Bill Preparation
Retrieve the signed Bill of Lading, rate confirmation, and Proof of Delivery from the TMS (McLeod, Aljex, AscendTMS) or load folder. Confirm shipper, consignee, pickup/delivery dates, pickup number, and PO match across all three documents. Mismatched consignee names are the most common reason an invoice gets kicked back in customer AP.
For LTL, confirm the NMFC item number and freight class on the BOL match the actual commodity. Density-based class shifts (e.g., class 70 vs. 85) are the highest-frequency reclass adjustment carriers issue. For truckload FAK rates, confirm the commodity falls within the tariff's exclusion list.
Compute linehaul from the customer contract or spot rate confirmation. Use practical miles (PC*Miler or Rand McNally) unless the contract specifies HHG or zip-to-zip. Document the mileage source — disputes over 20-50 mile differences are common and the carrier with the cited source wins.
Documentation Review
The POD must show consignee signature, delivery date/time, and piece count. Flag any OS&D notation (overage, shortage, damage) — these drive cargo claims and may delay invoicing pending resolution. Unsigned PODs or PODs with 'subject to count' notations are the most common reason customer AP holds payment.
Look for inside delivery, liftgate, residential, appointment, sort-and-segregate, or hazmat notations. Each maps to an accessorial that must be invoiced — drivers commonly perform the service without flagging dispatch, leaving money on the table.
Confirm Section 7 of the BOL (non-recourse) is signed appropriately and that prepaid/collect/third-party-bill matches the rate confirmation. Billing the wrong party — especially on third-party bill-to consignees — triggers a rebill cycle that delays payment 30-60 days.
Billing Accuracy and Auditing
Line-by-line compare the carrier invoice to the rate confirmation or tariff. For LTL, recompute using the carrier's published tariff with negotiated discount and FAK. Watch for absolute minimum charges applied to small shipments — these override the discounted rate calculation.
FSC should match the contract's DOE diesel index for the pickup week. Truckload FSC is typically cents-per-mile on a sliding scale; LTL FSC is a percentage of linehaul. Carriers occasionally lag the index update by a week — recover the difference on long lanes.
If the carrier issued a W&I (weight and inspection) certificate, verify the certificate cites scale ticket numbers and an inspector ID. Reweighs without documentation are challengeable. For dimensional reweighs, request the cube-out measurement and PCF density calculation — generic 'reclassed to higher class' notes without numbers are routinely overturned.
Cross-check detention against ELD or driver time-stamps and the rate con's free-time terms (typically 2 hours at pickup, 2 at delivery for TL). Confirm liftgate, inside delivery, layover, and stop-pay accessorials are supported by BOL notation or driver app entry. Detention invoiced without arrival/departure timestamps is the single largest source of customer short-pays.
If the audit finds a variance over the carrier's tolerance (commonly $10 or 2%), flag for dispute before payment release. Variances inside tolerance pass straight through to AP.
Dispute Resolution and Adjustments
Submit via the carrier's overcharge portal (OC&S, Old Dominion eClaims, XPO portal) within the contractual window — typically 180 days under Carmack, but many carrier rules tariffs shorten this to 90 or 60 days. Include the original invoice, signed BOL, rate confirmation, and recalculation worksheet.
Contact the consignee receiving manager directly and request a signed POD copy or driver-app delivery confirmation. Most customer AP departments require a clean POD within 14 days of invoice or will short-pay.
Carmack Amendment gives 9 months to file a written claim and 2 years (minimum) to file suit; most carrier rules tariffs require the claim within 9 months of delivery. Include OS&D exception report, photos, repair or replacement invoices, and salvage disposition. Track-and-trace screenshots from MacroPoint or project44 strengthen the claim.
Record the carrier's response (allowed, partial, denied), credit memo number, and adjustment amount. Post the credit to the original invoice in the accounting system — never as a standalone credit memo — so the lane-level cost reporting reflects the recovery.
Record Keeping and Reporting
Store the invoice, BOL, POD, rate con, audit worksheet, and any dispute correspondence in the TMS load folder. Retention is typically 3 years for non-hazmat and 3 years post-delivery for cargo claim documentation under 49 CFR 379.
Push audit results to the weekly dashboard: invoices reviewed, variance found, recovery dollars, carrier-by-carrier accuracy. Lanes with repeat overcharges should be flagged to the procurement team for the next bid cycle.
For shippers using third-party audit (Cass, AFS, nVision, Trax) or in-TMS audit modules, review the exception queue weekly. Auto-pass tolerances should be tuned quarterly — too tight floods the queue, too loose leaks recovery.
Payment Processing
Only clean-audited invoices release to AP. Match the carrier's terms (Net 30, quick-pay 2/10, factored through Triumph or RTS) and ensure the remit-to in the accounting system matches the carrier's current NOA (notice of assignment) if factored — paying the carrier directly when a factor is on file creates a double-pay liability.
Apply contractually agreed quick-pay discounts (commonly 2% net 10 or 3% net 2) where the cash position supports it. For factored carriers, the discount is governed by the NOA, not the carrier's request.
Match ACH and check clears to invoice numbers. Investigate any cleared payment without a matched audited invoice — these are the trail of carriers paid before audit completion and are the most common source of unrecoverable overpayment.
Use this template in Manifestly
- Commercial Driver's License (CDL) Checklist
- Post-Trip Vehicle Inspection Checklist
- Driver Safety Checklist
- Route Planning and Optimization Checklist
- Driver Incident Reporting Checklist
- Hours of Service Compliance Audit
- Sustainable Fleet Operations Checklist
- Fleet Allocation and Utilization Review
- Emergency Equipment Inspection Checklist
- FMCSA Compliance Checklist
- Fleet Vehicle Condition Checklist
- Hazardous Cargo Handling Checklist
- Motor Carrier TSA Security Compliance Checklist
- Transportation Risk Assessment Checklist
- Accident Investigation Checklist
- Hazardous Materials Checklist
- Vehicle Cleanliness and Detail Checklist
- Driver Pre-Trip Inspection Checklist
- Carrier Risk Management Checklist
- Driver Qualification File Audit Checklist
- Vehicle Inspection Checklist
- Equipment Inventory Audit
- Hazardous Materials Transportation Checklist
- Cargo Securement Checklist
- Vehicle Maintenance Schedule Checklist
- Loading Dock Safety Checklist
- Driver Onboarding Checklist
- Bill of Lading Review Checklist
- Oversized Load Preparation Checklist
- Temperature-Controlled Cargo Checklist
- International Fuel Tax Agreement (IFTA) Quarterly Filing Checklist
- EPA Regulations Compliance Checklist
- Hazmat Transportation Compliance Checklist
- Carrier Selection and Evaluation Checklist
- Air Transport Security Regulations Checklist
- Insurance Coverage Evaluation Checklist
- Freight Tender and Carrier RFP Checklist
- Motor Carrier Health and Safety Policy Review
- Driver Training and Development Checklist
- Crisis Management Plan Checklist
- Driver Offboarding Checklist
- Cargo Theft Prevention Checklist
- Fleet Telematics / ELD Implementation Checklist
- Workplace Diversity and Inclusion Checklist
- Driver Benefits Administration Checklist
- Transportation Management System (TMS) Evaluation Checklist
- Electronic Logging Device (ELD) Compliance Checklist
- HR Compliance Audit Checklist for Motor Carriers
- Fleet ELD and Telematics Upgrade
- Fleet Operations Data Analysis and Reporting
- Motor Carrier Cybersecurity Protocol Checklist
- Driver Onboarding Checklist
- Driver Payroll & Settlement Processing
- Fleet Modernization Initiative Checklist
- Fueling Checklist
- Delivery Checklist
- Motor Carrier Security Checklist
- Post-Trip Inspection Checklist
- Fleet Management Checklist
- Tractor and Trailer Preventive Maintenance Inspection
- DOT Substance Abuse Testing Compliance Checklist
- Cargo Weight and Balance Checklist
- Freight Inspection Checklist
- Pre-Trip Vehicle Inspection Checklist
- Driver Training Program Checklist
- DOT Compliance Checklist
- Customs and Border Protection (CBP) Compliance Checklist
- Department of Transportation (DOT) Audit Checklist
- Driver Performance Evaluation Checklist
- Motor Carrier Incident Response Plan Checklist
- Truckload Shipment Dispatch and Delivery Checklist
- Business Continuity Planning Checklist
- Driver Training Checklist
- Driver Performance Review and Feedback Checklist
- Mobile Application Deployment Checklist
- Transportation Cost Analysis Checklist
- Vehicle Repair and Maintenance Checklist
- Expense Reporting and Reimbursement Checklist
- Accounts Payable Checklist
- Employee Expense Policy Compliance Checklist
- Accounts Payable Ledger Checklist
- AP Payment Processing Checklist
- Invoice Processing Checklist
- Vendor Setup and Maintenance Checklist
- Employee Expense Reimbursement Checklist
- Accounts Payable Aging Report Checklist
- New Vendor Onboarding Checklist
- Accounts Payable Checklist
- Subcontractor Pay Application Checklist
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